Microarray analysis

This section focuses on analysing expression data from sources such as microarrays using tools found under the Microarray Analysis (Image expressionfolder) folder of the Toolbox. This includes tools for performing quality control of the data, transformation and normalization, statistical analysis to measure differential expression and annotation-based tests. A number of visualization tools such as volcano plots, MA plots, scatter plots, box plots, and heat maps are also available to aid interpretation of the results.

Tools for analysing RNA-Seq and small RNA data are available under the RNA-Seq and Small RNA Analysis (Image rna_seq_group_closed_16_n_p) folder of the Toolbox and are described in RNA-Seq analysis and miRNA analysis.