Remove Reference Variants

The variant tracks produced by the variant detection tools of CLC Genomics Workbench include reference alleles complementing a non-reference allele (i.e. a heterozygous variant where only one allele is different from the reference). In some situations, this information is not necessary, and these reference allele variants can be filtered away

        Toolbox | Resequencing Analysis (Image resequencing) | Variant Filtering (Image variant_filtering_folder_closed_16_h_p) | Remove Reference Variants

This opens a dialog where you can select a variant track (Image variant_track_16_n_p) that should be filtered.

Clicking Next and Finish to create a new track without the reference variants.