Extract Sequences

When right-clicking on the sequences (as opposed to the consensus sequence), the menu to the right of figure 18.17 is available, and allows you to Extract Sequences from the mapping as explained in Extract sequences. As opposed to the Extract from Selection tool, the Extract sequences will include all reads, not only the ones covered by the selection.

Image extractsequencesfromsamapping
Figure 18.17: Selecting the reads to include.