Read mapping formats

File type Suffix Import Export Description
ACE .ace X X No chromatogram or quality score
BAM (Compressed version of SAM) .bam X X See SAM import
CLC .clc X X Rich format including all information
CLC Assembly File .cas X   Output from the CLC Assembly Cell
SAM (Sequence Alignment/Map) .sam X X See Sequence assembly files
Zip export .zip   X Selected files in CLC format
Zip import .zip X   Contained files/folder structure