Creating graph tracks

Graph tracks can be created from sequences and mappings using two tools in the Toolbox:

        Toolbox | Track Tools (Image track_tools) | Graphs

The Create GC Contents Graph Track tool needs a sequence track as input and will create a graph track with the GC contents of that sequence. This can be then be displayed together with the sequence and other tracks in a track list.

The Create Mapping Graph Tracks can create the following graphs from a mapping track (see figure 24.13).

Image createmappinggraphtracks_step2
Figure 24.13: Creating graph track from mappings.

You can also create graph tracks from the track view or track list view by right-clicking the track you wish to use as input.