Taxonomic Profiling output

Clicking Next will allow you to specify the output as shown in figure 5.8.

Image taxpro_3
Figure 5.8: Specify the output.

The following outputs are available:

Sequence list output

The sequence lists with reads that were assigned to the reference database and host genome contain the following annotations:

In addition, the list of reference database reads contains the Taxonomy annotation with the full taxonomy of the taxon to which the read was assigned.

Taxonomic Profiling report

The Taxonomic Profiling report (figure 5.9) contains information about the taxonomic profiling run and databases used.

Image taxpro_5
Figure 5.9: The Taxonomic Profiling report.