Merge Abundance Tables

The Merge Abundance Table tool allows you to merge together abundance tables for different samples. The input can be OTU, functional, resistance, or whole metagenome taxonomic profiling abundance tables but not a mix of these. The output will be a merged table of the same nature as the ones input in the tool. The merged abundance table will include the metadata that was originally in the input abundance tables.

        Toolbox | Microbial Genomics Module (Image mgm_folder_closed_flat_16_h_p) | Metagenomics (Image wma_folder_open_flat_16_n_p) | Abundance Analysis (Image abundance_folder_closed_16_n_p) | Merge Abundance Tables (Image merge_abundance_tables_16_n_p)

If you select Create Report, the tool will create a summary report table. For each input abundance table, the report will contain the name of the abundance table, the number of samples in the table and the number of features contained in the table.

Merged abundance tables can be used as input for various tools: