Coverage table
Besides standard information such as position etc, the coverage table (figure 27.8) lists the following information for each position in the whole target:
- Name
- The name of the target region.
- Target region position
- The name of the target region.
- Reference base
- The base in the reference sequence.
- Coverage
- The number of bases mapped to this position. Note that bases in over-lapping pairs are counted only once. Also note that if the user has chosen the Ignore non-specific matches or Ignore broken pairs options, these reads will be ignored. (see discussion on coverage in Reference sequence statistics).
Figure 27.8: The targeted region coverage table for the same region as shown in same as shown in figures 27.6 and figure 27.7.