The Upload Prepared QCI Interpret Report tool uploads a sample to QCI Interpret or QCI Interpret Translational from a prepared upload from the Prepare QCI Interpret Upload tool.
Upload Prepared QCI Interpret Report
To run Upload Prepared QCI Interpret Report, go to:
Toolbox | Biomedical Genomics Analysis () | QCI Interpret Integration () | Upload Prepared QCI Interpret Report ()
In the tool wizard, choose a QCI Interpret report from Prepare QCI Interpret Upload. You can also choose a already upload QCI Interpret report to upload it again.
Then choose your QCI Region and how to log in. To log in using a browser, choose the Browser option, then click the Log in button to open a new browser (or new tab) where you can log in, and give the workbench permission to upload samples to QCI on your behalf. To upload with API key you need an API user account, please send an email to firstname.lastname@example.org and ask for confirmation if the QCI account is API-enabled. The license team can then provide the link to API Explorer page where you can log in to see the API key ID and key secret.
Note: Do not share workflows that contain your QCI Interpret login information. A workflow containing this tool contains your login information if the tool configuration has values set for API Key ID, or API Key Secret, or if you have logged in using a browser.
The uploaded sample can be shared with QCI users by adding a comma separated list of emails in the Reviewers setting.
The output is a report that shows a summary of the data in the sample, information about the upload, and a link to the sample list in QCI Interpret.