The scatter plot () shows the clonotypes frequency in two samples for a given chain (figure 7.23).
The chain and the two samples to be compared can be changed from the side panel.
Scatter plot for Clonotype Sample Comparison
Figure 7.23: Scatter plot with clonotype frequencies for a particular chain type. Note that private clonotypes have frequencies 0 in one of the samples. Due to the log scale, they cannot be plotted at frequency 0.