Create QIAseq Hybrid Capture CNV Control Mapping (with UMI) (Illumina)
The Create QIAseq Hybrid Capture CNV Control Mapping (with UMI) (Illumina) template workflow is designed to support the analysis of UMI data generated with the hybrid capture QIAseq Human Exome and QIAseq xHYB Human kits in combination with the QIASeq Multimodal DNA/RNA Library Kit.
The workflow generates controls suitable for the CNV detection step of the Identify QIAseq Hybrid Capture DNA Somatic Variants (with UMI) (Illumina) and Identify QIAseq Hybrid Capture DNA Somatic Variants with TMB and MSI (with UMI) (Illumina) (beta) template workflows, see Identify QIAseq Multimodal DNA Library Kit Variants. We recommend a minimum of 3 control samples be used for creating control mappings.
The Create QIAseq Hybrid Capture CNV Control Mapping (with UMI) (Illumina) workflow can be found at:
Template Workflows | Biomedical Workflows (
) | QIAseq Sample Analysis (
) | QIAseq DNA workflows (
) | Create QIAseq Hybrid Capture CNV Control Mapping (with UMI) (Illumina) (
)
This workflow includes the same initial processing steps as the Identify QIAseq Hybrid Capture DNA Somatic Variants (with UMI) (Illumina) and Identify QIAseq Hybrid Capture DNA Somatic Variants with TMB and MSI (with UMI) (Illumina) (beta) template workflows. Thus, the initial steps to launch these workflows are similar.
Launching using the QIAseq Panel Analysis Assistant
The workflow is also available in the QIAseq Panel Analysis Assistant under Human Exome.
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