Hydrogen bonds

(Image projecttree_hbond_16_h_p)

The Show Hydrogen Bond visualization style may be applied to molecules and atom group entries in the project tree. If this style is enabled for a project tree entry, hydrogen bonds will be shown to all other currently visible objects. The hydrogen bonds are updated dynamically: if a molecule is toggled off, the hydrogen bonds to it will not be shown.

It is possible to customize the color of the hydrogen bonds using the context menu.

Image hydrogenbonds
Figure 14.10: The hydrogen bond visualization setting, with custom bond color.