QIAseq template workflows consolidation overview
The template workflows for QIAseq data analysis included with Biomedical Genomics Analysis 26.0 plugin have been consolidated and redesigned. This section lists each template workflow in version 26.0 along with the corresponding workflows from version 25.x that it replaces.
- Analyze QIAseq DNA Somatic (Illumina)
- Create QIAseq DNA CNV Control Mapping (Illumina)
- Identify QIAseq DNA Somatic Variants (Illumina)
- Identify QIAseq DNA Somatic Variants with HRD Score (Illumina) (beta)
- Identify QIAseq DNA Somatic Variants with TMB Score (Illumina)
- Analyze QIAseq DNA Germline (Illumina)
- Create QIAseq DNA CNV Control Mapping (Illumina)
- Identify QIAseq DNA Germline Variants (Illumina)
- Analyze QIAseq DNA Somatic (Ion Torrent)
- Create QIAseq DNA CNV Control Mapping (Ion Torrent)
- Identify QIAseq DNA Somatic Variants (Ion Torrent)
- Identify QIAseq DNA Somatic Variants with TMB Score (Ion Torrent)
- Analyze QIAseq DNA Germline (Ion Torrent)
- Create QIAseq DNA CNV Control Mapping (Ion Torrent)
- Identify QIAseq DNA Germline Variants (Ion Torrent)
- Analyze QIAseq DNA Pro Somatic (Illumina)
- Create QIAseq DNA Pro CNV Control Mapping (Illumina)
- Identify QIAseq DNA Pro Somatic Variants (Illumina)
- Identify QIAseq DNA Pro Somatic Variants with LOH Detection (Illumina)
- Identify QIAseq DNA Pro Somatic Variants with MSI (Illumina)
- Analyze QIAseq DNA Pro Germline (Illumina)
- Create QIAseq DNA Pro CNV Control Mapping (Illumina)
- Identify QIAseq DNA Pro Germline Variants (Illumina)
- Analyze QIAseq DNA Pro Somatic (Ion Torrent)
- Create QIAseq DNA Pro CNV Control Mapping (Ion Torrent)
- Identify QIAseq DNA Pro Somatic Variants (Ion Torrent)
- Analyze QIAseq DNA Pro Germline (Ion Torrent)
- Create QIAseq DNA Pro CNV Control Mapping (Ion Torrent)
- Identify QIAseq DNA Pro Germline Variants (Ion Torrent)
- Analyze QIAseq DNA Ultra Somatic (Illumina)
- Create QIAseq DNA Ultra CNV Control Mapping (Illumina)
- Identify QIAseq DNA Ultra Somatic Variants (Illumina)
- Analyze QIAseq Hybrid Capture DNA Somatic (Illumina)
- Create QIAseq Hybrid Capture CNV Control Mapping (Illumina)
- Identify QIAseq Hybrid Capture DNA Somatic Variants (Illumina)
- Identify QIAseq Hybrid Capture DNA Somatic Variants including Mitochondrial (Illumina)
- Analyze QIAseq Hybrid Capture DNA Somatic (with UMI) (Illumina)
- Create QIAseq Hybrid Capture CNV Control Mapping (with UMI) (Illumina)
- Identify QIAseq Hybrid Capture DNA Somatic Variants (with UMI) (Illumina)
- Analyze QIAseq Hybrid Capture DNA Germline (Illumina)
- Create QIAseq Hybrid Capture CNV Control Mapping (Illumina)
- Identify QIAseq Hybrid Capture DNA Germline Variants (Illumina)
- Identify QIAseq Hybrid Capture DNA Germline Variants including Mitochondrial (Illumina)
- Analyze QIAseq Hybrid Capture in Trio
- Identify QIAseq Hybrid Capture Causal Inherited Variants in Trio
- Analyze QIAseq Multimodal DNA Panel (Illumina)
This workflow replaces the DNA arm of:
- Perform QIAseq Multimodal Panel Analysis (Illumina)
- Perform QIAseq Multimodal Panel Analysis with TMB and MSI (Illumina)
For the RNA arm, see QIAseq RNA workflows.
- Analyze QIAseq Multimodal DNA Library Kit Somatic WGS (with UMI) (Illumina)
- Identify QIAseq Multimodal DNA Library Kit with UMI Somatic Variants (WGS) (Illumina)
- Analyze QIAseq Somatic WGS (Illumina)
- Identify QIAseq Somatic Variants (WGS) (Illumina)
- Analyze QIAseq Hybrid Capture RNA (Illumina)
- Perform QIAseq Hybrid Capture RNA Analysis (Illumina)
- Analyze QIAseq Multimodal RNA Panel (Illumina)
This workflow replaces the RNA arm of:
- Perform QIAseq Multimodal Panel Analysis (Illumina)
- Perform QIAseq Multimodal Panel Analysis with TMB and MSI (Illumina)
For the DNA arm, see QIAseq DNA workflows.
- Analyze QIAseq RNA (Illumina)
- Quantify QIAseq RNA Expression
- Analyze QIAseq RNAscan
- Detect QIAseq RNAscan Fusions
- Analyze QIAseq RNA Fusion XP (Illumina)
- Perform QIAseq RNA Fusion XP Analysis (Illumina)
- Analyze QIAseq RNA Fusion XP (Ion Torrent)
- Perform QIAseq RNA Fusion XP Analysis (Ion Torrent)
- Analyze QIAseq Multimodal RNA Library Kit (Illumina)
- Perform QIAseq Multimodal RNA Library Kit Analysis (Illumina)
- Analyze QIAseq UPX 3' RNA (Illumina)
- Quantify QIAseq UPX 3'
- Analyze QIAseq FastSelect and UPXome RNA (Illumina)
- Perform QIAseq FastSelect RNA Analysis
- Perform QIAseq UPXome RNA Analysis
- Analyze QIAseq miRNA (Illumina/Ion Torrent)
- QIAseq miRNA Quantification
- Analyze QIAseq Methyl (Illumina)
- Detect QIAseq Methylation
- Analyze QIAseq Immune Repertoire (Illumina)
- Perform QIAseq Immune Repertoire Analysis
- Analyze QIAseq Targeted TCR (Illumina)
- Perform QIAseq Targeted TCR Analysis