Side Panel settings

The settings in the Side Panel are a subset of the settings in the normal sequence view described in Sequence settings in Side Panel. However, there are two additional groups of settings unique to the secondary structure 2D view: Secondary structure.

Image layoutstrategy1
Figure 22.10: Auto layout. Overlaps are minimized.

Image layoutstrategy2
Figure 22.11: Proportional layout. Length of the arc is proportional to the number of residues in the arc.

Image layoutstrategy3
Figure 22.12: Even spread. Stems are spread evenly around loops.