Gene coverage
In the gene coverage track you can see coverage statistics for each gene (figure 27.13). You can see the numbers by going to the table () view of the track.
- Chromosome The name is taken from the reference sequence used for mapping.
- Region The gene region.
- Gene specific columns A number of columns from the Genes track used as input to QC for Targeted Sequencing. These can for example be name, source and gene_version.
- Targets The number of targets in the gene.
- Target bases The number of bases in the target regions in the gene.
- Target coverage (%) The percentage of bases in targets with coverage above the threshold.
Figure 27.15: An example of a gene coverage track.