LightSpeed Long Reads to Germline Variants (beta) outputs
LightSpeed Long Reads to Germline Variants (beta) can produce the following outputs:
- Genotype track The identified germline variants including phasing information. The genotype track is described in detail in section 13.2.
- Report A report providing information about each step, see Report from LightSpeed Long Reads to Germline Variants for details.
- Reads track A read mapping. If a reads track is selected as output, runtime will be significantly increased.
- Unmapped reads Sequence lists containing reads that could not be mapped.