LightSpeed Fastq to Somatic Variants Tumor Normal outputs
LightSpeed Fastq to Somatic Variants Tumor Normal can produce the following outputs:
- Somatic variant track The identified somatic variants.
- Ignored regions A track providing a list of regions where it was not possible to detect variants due to high complexity among the initial variants being tested.
- Report A report providing information about each step, see Report for details.
- Tumor reads track A read mapping of the tumor reads. If a reads track is selected as output, runtime will be increased.
- Normal reads track A read mapping of the normal reads. If a reads track is selected as output, runtime will be increased.