Protein analyses
CLC Main Workbench offers a number of analyses of proteins as described in this chapter.
Note that the SignalP and TMHMM plugin allows you to predict signal peptides. For more information, please read the plugin manual at http://resources.qiagenbioinformatics.com/manuals/signalP/current/SignalP_User_Manual.pdf.
The TMHMM plugin allows you to predict transmembrane helix. For more information, please read the plugin manual at http://resources.qiagenbioinformatics.com/manuals/tmhmm/current/Tmhmm_User_Manual.pdf.
Subsections
- Protein charge
- Antigenicity
- Hydrophobicity
- Download Pfam Database
- Pfam domain search
- Download 3D Protein Structure Database
- Find and Model Structure
- Secondary structure prediction
- Protein report
- Reverse translation from protein into DNA
- Proteolytic cleavage detection