PAM60 log-odds matrix
A | C | D | E | F | G | H | I | K | L | M | N | P | Q | R | S | T | V | W | Y | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A | 5 | -5 | -2 | -1 | -6 | 0 | -5 | -3 | -5 | -4 | -3 | -2 | 0 | -3 | -5 | 1 | 1 | -1 | -10 | -6 |
C | -5 | 9 | -10 | -10 | -9 | -7 | -6 | -4 | -10 | -11 | -10 | -7 | -6 | -10 | -6 | -1 | -5 | -4 | -12 | -2 |
D | -2 | -10 | 7 | 3 | -11 | -2 | -2 | -5 | -2 | -9 | -7 | 2 | -5 | -1 | -6 | -2 | -3 | -6 | -11 | -8 |
E | -1 | -10 | 3 | 7 | -10 | -2 | -3 | -4 | -3 | -7 | -5 | 0 | -3 | 2 | -6 | -2 | -4 | -4 | -12 | -7 |
F | -6 | -9 | -11 | -10 | 8 | -7 | -4 | -1 | -10 | -1 | -2 | -6 | -7 | -9 | -7 | -5 | -6 | -5 | -3 | 3 |
G | 0 | -7 | -2 | -2 | -7 | 6 | -6 | -7 | -5 | -8 | -6 | -1 | -4 | -5 | -7 | 0 | -3 | -4 | -11 | -10 |
H | -5 | -6 | -2 | -3 | -4 | -6 | 8 | -6 | -4 | -4 | -7 | 1 | -2 | 2 | 0 | -4 | -5 | -5 | -5 | -2 |
I | -3 | -4 | -5 | -4 | -1 | -7 | -6 | 7 | -4 | 0 | 1 | -4 | -6 | -5 | -4 | -4 | -1 | 3 | -10 | -4 |
K | -5 | -10 | -2 | -3 | -10 | -5 | -4 | -4 | 6 | -6 | 0 | 0 | -4 | -1 | 2 | -2 | -2 | -6 | -8 | -7 |
L | -4 | -11 | -9 | -7 | -1 | -8 | -4 | 0 | -6 | 6 | 2 | -5 | -5 | -3 | -6 | -6 | -5 | -1 | -4 | -5 |
M | -3 | -10 | -7 | -5 | -2 | -6 | -7 | 1 | 0 | 2 | 10 | -6 | -6 | -2 | -2 | -4 | -2 | 0 | -9 | -7 |
N | -2 | -7 | 2 | 0 | -6 | -1 | 1 | -4 | 0 | -5 | -6 | 6 | -4 | -2 | -3 | 1 | -1 | -5 | -6 | -3 |
P | 0 | -6 | -5 | -3 | -7 | -4 | -2 | -6 | -4 | -5 | -6 | -4 | 7 | -1 | -2 | 0 | -2 | -4 | -10 | -10 |
Q | -3 | -10 | -1 | 2 | -9 | -5 | 2 | -5 | -1 | -3 | -2 | -2 | -1 | 7 | 0 | -3 | -4 | -5 | -9 | -8 |
R | -5 | -6 | -6 | -6 | -7 | -7 | 0 | -4 | 2 | -6 | -2 | -3 | -2 | 0 | 8 | -2 | -4 | -5 | 0 | -8 |
S | 1 | -1 | -2 | -2 | -5 | 0 | -4 | -4 | -2 | -6 | -4 | 1 | 0 | -3 | -2 | 5 | 1 | -4 | -4 | -5 |
T | 1 | -5 | -3 | -4 | -6 | -3 | -5 | -1 | -2 | -5 | -2 | -1 | -2 | -4 | -4 | 1 | 6 | -1 | -9 | -5 |
V | -1 | -4 | -6 | -4 | -5 | -4 | -5 | 3 | -6 | -1 | 0 | -5 | -4 | -5 | -5 | -4 | -1 | 6 | -11 | -5 |
W | -10 | -12 | -11 | -12 | -3 | -11 | -5 | -10 | -8 | -4 | -9 | -6 | -10 | -9 | 0 | -4 | -9 | -11 | 13 | -3 |
Y | -6 | -2 | -8 | -7 | 3 | -10 | -2 | -4 | -7 | -5 | -7 | -3 | -10 | -8 | -8 | -5 | -5 | -5 | -3 | 9 |