Cumulative frequencies for Clonotypes
The cumulative frequency curve (
) shows the cumulative frequencies of the identified clonotypes, ordered by descending count (figure 7.22).
If the curve is steep in the beginning and then flattens, it indicates that a few clonotypes account for most of the reads.
On the other hand, if the curve is more linear, it indicates a more even distribution of reads among the clonotypes.
Figure 7.22: The cumulative frequencies of the TRA chain. The chain can be changed from the side panel.