Download Pathway Database

Calling pathways using the Identify Pathways tool requires a pathway database. Such databases can be obtained using the Download Pathway Database tool. To run the Download Pathway Database tool go to

        Toolbox | Microbial Genomics Module (Image mgm_folder_closed_flat_16_h_p) | Functional Analysis (Image functional_analysis_folder_closed_16_n_p) | Download Pathway Database (Image download_pathway_db_16_n_p)

In the first step of the wizard a pathway database can be selected. Currently, the only available option is MetaCyc. Upon clicking "Next" the EULA for the selected database will appear, which needs to be accepted before proceeding to the download.