Interpreting the output of Score Velocity Genes
Score Velocity Genes produces one table (
), with one gene per row.
For each gene, the table has several columns, depending on how the groups of cells have been defined.
For example, if an input Velocity Matrix named 'velocity matrix' was used and three groups `Platelet', `B cell', and `T cell' were defined, the output will contain the following columns:
- Name and Identifier: the gene name and identifier, as present in the input Velocity Matrix;
- velocity matrix: the score for the entire data set;
- Platelet, B cell and T cell: the scores calculated using the cells belonging to the three groups.
Note that only the velocity genes for which velocity estimates are present in the input Velocity Matrix are present in the output.