--child-gender <[MALE, FEMALE]> |
The gender of the child (default: FEMALE) |
--chromosome-m-name <String> |
The name of the M chromosome in the samples (or, if no exact match exists, the chromsome containing this text) Can be left empty if this chromosome is not part of the input. (default: M) |
--chromosome-x-name <String> |
The name of the X chromosome in the samples (or, if no exact match exists, the chromsome containing this text). Can be left empty if this chromosome is not part of the input. (default: X) |
--chromosome-y-name <String> |
The name of the Y chromosome in the samples (or, if no exact match exists, the chromsome containing this text) Can be left empty if this chromosome is not part of the input. (default: Y) |
-d, --destination <ClcServerObjectUrl> |
Destination file or folder on server. If not specified the folder of the first input object will be used. |
--father <ClcObjectUrl> |
Choose the track containing the father's variants |
-i, --input <ClcObjectUrl> |
Input data on server |
--is-full-human-genome <Boolean> |
Whether the child and parents tracks are defined over the entire human genome. This requires extra information that allows the analysis to be clever about variants on the X, Y and M chromosomes. (default: false) |
--log <Boolean> |
Enable creation of algo log file. (default: true) |
--mother <ClcObjectUrl> |
Choose the track containing the mother's variants |
