-d, --destination <ClcServerObjectUrl> |
Destination file or folder on server. If not specified the folder of the first input object will be used. |
--free-unaligned |
|
Integer: 0 <= x <= 5 |
Maximum number of end mismatches without score penalty (default: 0) |
--gap |
|
Integer: 1 <= x <= 30 |
The cost of having a gap (default: 3) |
-i, --input <ClcObjectUrl> |
Input data on server |
--log <Boolean> |
Enable creation of algo log file. (default: true) |
--min-score |
|
Integer: 1 <= x <= 500 |
Minimum score for accepting this overlap (default: 8) |
--mismatch |
|
Integer: 1 <= x <= 30 |
The cost of having a mismatch (default: 2) |
--report <Boolean> |
Create report (default: true) |
