-d, --destination <ClcServerObjectUrl> |
Destination file or folder on server. |
--discard-quality-scores <Boolean> |
Discard quality scores (default: false) |
--discard-seq-names <Boolean> |
Discard sequence names (default: false) |
-f <ClcFileUrl> |
Selected files |
--log <Boolean> |
Enable creation of algo log file. (default: true) |
--only-sequencing-zmws <Boolean> |
Read only sequencing ZMWs (default: false) |
--quality-score <[SANGER, ILLUMINA_OLD, ILLUMINA_PHRED, ILLUMINA_TRIM]> |
Quality score (default: SANGER) |
--read-hq-regions <Boolean> |
Read HQ regions (default: false) |
