-d, --destination <ClcServerObjectUrl> |
Destination file or folder on server. If not specified the folder of the first input object will be used. |
-i, --input <ClcObjectUrl> |
Input data on server |
--log <Boolean> |
Enable creation of algo log file. (default: true) |
--sample-pct |
|
Integer: 1 <= x <= 100 |
The percentage of the sub-sample in terms of reads (for single reads) and of pairs of reads (for paired reads) (default: 20) |
--sample-size |
|
Long: 1 <= x <= 9223372036854775807 |
The size of the sub-sample in terms of reads (paired reads count as two) (default: 1000000) |
--sample-size-type <[SAMPLE_SIZE, SAMPLE_PERCENTAGE]> |
Whether the size of the sub-sample should be based on a number of read or a percentage of reads (default: SAMPLE_SIZE) |
--sample-type <[SAMPLE_REPRODUCIBLE, SAMPLE_RANDOM]> |
Sample type (default: SAMPLE_REPRODUCIBLE) |
