Create an alignment
Alignments can be created from sequences, sequence lists, existing alignments and from any combination of the three.
To create an alignment, go to:
Toolbox | Alignments and Trees (
)|
Create Alignment (
)
This opens the dialog shown in figure 14.1.
Figure 14.1: Creating an alignment.
After selecting the elements to align, you are presented with options that can be configured (figure 14.2).
Figure 14.2: Adjusting alignment algorithm parameters.
Subsections