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• Introduction to the CLC Genomics Cloud
  • Overview of CLC Genomics Cloud
  • CLC Genomics Cloud requirements
  • Contact information
  • Installing the CLC Cloud Module
    • Licensing modules
    • Uninstalling modules
  • Installing the Cloud Server Plugin
• Setting up CLC Genomics Cloud resources on AWS
  • Setting up AWS resources
  • Adding more AWS Batch queues for CLC jobs
  • Adding more AWS IAM users
  • Deleting or redeploying CLC Genomics Cloud infrastructure on AWS
• Using a CLC Workbench to work on the cloud
  • Prerequisites for working on the cloud using a Workbench
  • Configuring an AWS Connection in the Workbench
  • Submitting analyses to AWS from a Workbench
  • Working with AWS S3 using the Remote Files tab
  • Accessing results from the Processes tab
• Using a CLC Server to work on the cloud
  • Benefits of submitting jobs via a CLC Server
  • AWS Connections in the CLC Server
  • Configuring cloud presets
  • Browse AWS S3 locations
  • Submitting workflows to the cloud via a CLC Server using a CLC Workbench
  • Submitting workflows to the cloud using the CLC Server Command Line Tools
• Integrating third party tools into CLC software
  • Installing external applications in a CLC Workbench
• General information about inputs and results
  • General information about input data for cloud analyses
    • Reference data for analyses on the cloud
    • Using locally held data for analyses on AWS S3
  • General information about outputs from cloud analyses
• Monitoring and reviewing CLC cloud jobs
  • Using a CLC Workbench to monitor and review cloud jobs
  • Using a CLC Server to monitor and review cloud jobs
  • Using the AWS Console to monitor and review cloud jobs
• Appendix
  • Standard AWS Batch queues for CLC Genomics Cloud
  • AWS Batch queues, compute environments, AMIs and images
  • System file retention policies
  • Making custom plugins available for cloud analyses

Contact information

QIAGEN CLC Cloud Module is developed by:

QIAGEN Aarhus A/S
Kalkværksvej 5, 11.
DK - 8000 Aarhus C
Denmark

https://digitalinsights.qiagen.com/

Email: ts-bioinformatics@qiagen.com

The QIAGEN Aarhus team continuously improves products with your interests in mind. We welcome feedback and suggestions for new features or improvements. How to contact us is described at: https://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/index.php?manual=Contact_information_citation.html

You can also make use of our online documentation resources, including:

• Core product manuals https://digitalinsights.qiagen.com/technical-support/manuals/
• Plugin manuals https://digitalinsights.qiagen.com/products-overview/plugins/
• Tutorials https://digitalinsights.qiagen.com/support/tutorials/
• Frequently Asked Questions https://qiagen.my.salesforce-sites.com/KnowledgeBase/KnowledgeNavigatorPage

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