Identify candidate variants (legacy)

To run the Identify candidate variants, go to the toolbox:

        Toolbox | Legacy Tools (Image legacy_tool_closed_16_h_p) | Identify Candidate Variants (legacy) (Image identify_candidate_variants_16_n_p)

The Identify Candidate Variants (legacy) tool can be used to identify only the variants that fulfill certain criteria. This means that the Identify candidate variants tool is to be used together with a filter criteria file created with the Create Filter Criteria (legacy) tool (see Create Filter Criteria (legacy)). Hence, the Identify Candidate Variants (legacy) tool takes tracks with annotated or non-annotated variants as input as well as the relevant filter criteria file that was generated with the Create Filter Criteria tool.

The output from the Identify Candidate Variants tool is a variant track (and table) that contains only the variants that fulfill the specified filter criteria.