Build Functional Profile

To compute the number of reads in a sample mapping to regions involved with Pfam domains or GO terms, you can run the Build Functional Profile tool by going to:

        Metagenomics (Image wma_folder_open_flat_16_n_p) | Functional Analysis (Image functional_analysis_folder_closed_16_n_p) | Build Functional Profile (Image build_functional_profile_16_n_p)

The following parameters can then be set:

You can then select which output elements should be generated.

The resulting functional abundance tables store the number of reads corresponding to each Pfam domain, GO term or best BLAST hit.



Subsections