The clc_join_mappings Program

Using this program, it is possible to join two or more cas mapping files into one. It is sometimes convenient to perform read mappings on different sets of reads as independent runs. These runs can then be joined later with the clc_join_mappings program. It is a requirement that the mappings have exactly the same reference sequence files in the same order to join them.

Options for clc_join_mappings can be found in Options for All Programs.