Variant Detectors - the outputs

The Variant Detection Tools have the following outputs: a variant track, an annotated variant table and a report (figure 27.29). The report contains information on the estimated error model and, as only the Fixed ploidy and the Low Frequency variant callers uses an error model, the report is only available for those, and not for the Basic Variant caller. The outputs are described below.

Image variantdetectorsoutputoptions
Figure 27.29: Output options.