IntroductionThis document describes the CLC Assembly Cell. This package includes command line tools for performing de novo assemblies, read mappings, and basic downstream analysis of the results of these analyses. CLC Assembly Cell also includes utility tools for certain types of data pre-processing and sequence format conversion.
The names of the programs of CLC Assembly Cell have changed since version 3.2.2 and earlier. Please see Updating program names from earlier versions for more information.