• Product manuals

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• Introduction to the Genomics Analysis Portal
  • Contact information
• Genomics Analysis Portal interface
  • Start an analysis using data stored locally
  • Start an analysis using data stored in BaseSpace
  • Analyses table
  • Sample analysis details panel
• Workflows for the Genomics Analysis Portal
  • Workflow creation and configuration
  • Workflow Installation
  • Workflow permissions settings
• Administration
  • BaseSpace configuration
    • HTTPS using Apache 2.4.x as a reverse proxy
    • Use Genomics Analysis Portal built-in support for HTTPS
    • Creating a PKCS12 keystore file
    • Create a new BaseSpace application
    • Configure BaseSpace connection from within Genomics Analysis Portal
  • Service user
  • Archiving and Cleanup
  • CLC Genomics Server administration for the Genomics Analysis Portal

Creating a PKCS12 keystore file

If the certificate is not supplied in a pkcs12 keystore file, it can be put into one by combining the private key and the signed certificate obtained from the Certificate Authority by using openssl:

openssl pkcs12 -export -out keystore.pkcs12 -inkey private.key -in certificate.crt -name "tomcat"

This will take the private key from the file private.key and the signed certificate from certificate.crt and generate a pkcs12-store in the keystore.pkcs12 file.

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