Working with annotations
Annotations provide information about specific regions of a sequence.
Annotations derive from different sources:
- Sequences downloaded from databases like UniProt are annotated.
- In some of the data formats that can be imported into CLC Drug Discovery Workbench, sequences can have annotations (e.g. the Swiss-Prot format).
- The result of a number of analyses in CLC Drug Discovery Workbench are annotations on the sequence (e.g. Pfam Domain Search and Motif Search).
- A protein structure can be linked with a sequence (Link sequence or sequence alignment to structure), and atom groups defined on the structure transferred to sequence annotations or vica versa (Transfer annotations between sequence and structure).
- You can manually add annotations to a sequence (described in
the Adding
annotations).
If you would like to extract parts of a sequence (or several sequences) based on its annotations, you can find a description of how to do this in Extract Annotations.
Note! Annotations are included if you export the sequence in CLC format. When exporting in other formats, annotations are not preserved in the exported file.
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