Installation

The CLC Server Command Line Tools can be downloaded from https://digitalinsights.qiagen.com/products-overview/discovery-insights-portfolio/enterprise-ngs-solutions/clc-server-command-line-tools/ and is available for Windows, Mac and Linux. You can install the tools on any computer that can connect to your CLC Server.

The system requirements of CLC Server Command Line Tools are these:

You will also need access to a compatible version of the CLC Server. No additional license is required for running the CLC Server Command Line Tools.

Redirection of temporary files

By default, temporary files generated by the CLC Server Command Line Tools are written to the default directory for temporary files on the system the CLC Server Command Line Tools are installed on. The location these files are written to can be changed by creating a file called clcserver.vmoptions in the installation directory of the CLC Server Command Line Tools and adding a line of the following form to that file:

-Djava.io.tmpdir=/path/to/tmp

where the full path to the new tmp directory is supplied after the equals sign.

Note: Changing the location for CLC Server temporary files, is done separately. How to do this is described at:

https://resources.qiagenbioinformatics.com/manuals/clcserver/current/admin/index.php?manual=Changing_tmp_directory.html