Bibliography

Li, 2016
Li, H. (2016).
Minimap and miniasm: fast mapping and de novo assembly for noisy long sequences.
Bioinformatics, 32(14):2103-2110.

Li, 2018
Li, H. (2018).
Minimap2: pairwise alignment for nucleotide sequences.
Bioinformatics, 34(18):3094-3100.

Mortazavi et al., 2008
Mortazavi, A., Williams, B. A., McCue, K., Schaeffer, L., and Wold, B. (2008).
Mapping and quantifying mammalian transcriptomes by rna-seq.
Nat Methods, 5(7):621-628.

Vaser et al., 2017
Vaser, R., Sovic, I., Nagarajan, N., and Šikic, M. (2017).
Fast and accurate de novo genome assembly from long uncorrected reads.
Genome Research, 27(5):737-746.

Wick and Holt, 2019
Wick, R. R. and Holt, K. E. (2019).
Benchmarking of long-read assemblers for prokaryote whole genome sequencing.
F1000Research, 8:2138.