Custom atom groups

In some situations it may be relevant to use a unique visualization style or color to highlight a particular set of atoms, or to visualize only a subset of atoms from a molecule. This can be done by making an atom group selection. Atoms can be selected in different ways, as listed below. When an atom group has been created, it appears as an entry in the Project Tree in the category "Selections". The atoms can then be hidden or shown, and the visualization changed, just as for the molecules in the Project Tree.

Atom groups can be deleted from the context menu, when selecting them in the Project Tree.

Image custom_atom_groups
Figure 13.10: An atom group that has been highlighted by adding a unique visualization style.