A folder with the name Legacy Tools () is found at the bottom of the toolbox. The tools found in this folder are tools that have been used in older versions of the workbench but are now deprecated. These tools will be retired in a future version of the workbench.
If you are using tools in the Legacy section of the Toolbox in workflows, then we recommend redesigning those workflows to exclude these tools. In the cases where a tool has been deprecated and a new tool introduced to take its place, please try updating the workflows to include the new tool.
If you have concerns about the retirement of particular tools currently appearing in the Legacy section of the Toolbox, please contact our Support team at [email protected].
For example, the Identify Candidate Variants (legacy) tool that previously was moved to the 'Legacy Tools' folder has now been completely removed. Please use the current tools in the 'Identify Candidate Variants' folder.