Analyzing Data in IPA

Ingenuity Pathway Analysis enables you to analyze and visualize RNA-Seq datasets, eliminating the obstacles between data and biological insight. For example, IPA can predict upstream regulation and downstream outcomes from your expression data, and identify relevant signaling and metabolic pathways. Figure 5.1 shows a newly opened analysis in IPA.

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Figure 5.1: The first window when opening an analysis in IPA

Figure 5.2 shows some of the visual capabilities of IPA.

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Figure 5.2: Another IPA application screenshot

For more information about IPA, please visit