• Product manuals

Browse the manual

• Introduction
• Uploading data to IPA using the Pathway Analysis tool
  • Error handling
• Import Expression Data
  • Metadata and expression data matrix
• Ingenuity Pathway Analysis workflows
  • Analyze Count Matrix and Upload Comparisons to IPA
    • Running the Analyze Count Matrix and Upload Comparisons to IPA Workflow
  • Analyze Expression Data and Upload Comparisons to IPA
    • Running the Analyze Expression Data and Upload Comparisons to IPA Workflow
• Analyzing Data in IPA
• Install and uninstall plugins
  • Installation of plugins
  • Uninstalling plugins

Analyzing Data in IPA

Ingenuity Pathway Analysis enables you to analyze and visualize RNA-Seq datasets, eliminating the obstacles between data and biological insight. For example, IPA can predict upstream regulation and downstream outcomes from your expression data, and identify relevant signaling and metabolic pathways. Figure 5.1 shows a newly opened analysis in IPA.

Figure 5.1: The first window when opening an analysis in IPA

Figure 5.2 shows some of the visual capabilities of IPA.

Figure 5.2: Another IPA application screenshot

For more information about IPA, please visit https://digitalinsights.qiagen.com/products-overview/discovery-insights-portfolio/analysis-and-visualization/qiagen-ipa/.

---