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• Introduction
  • Prerequisites
• Configuring AWS credentials
• Configuring the cloud connection
• Input data location considerations
• Running workflows on a CLC Genomics Cloud Engine
• Cloud Job Search
  • Downloading all results
  • Selective download of results
• Cloud connections via a CLC Server
  • Configuring the Cloud Server Plugin
  • Configuring GCE presets
• External applications in the cloud
• Troubleshooting
• Installing and uninstalling Workbench plugins
  • Installation of Workbench plugins
  • Uninstalling Workbench plugins

Introduction

This is the manual for Cloud Plugin 22.0.1. With this plugin installed on a CLC Workbench, you can configure access to a CLC Genomics Cloud Engine (GCE) and submit workflows to run there. The Cloud Job Search tool is also installed, allowing you to find jobs and download results from these analyses (Cloud Job Search).

A list of prerequisites is provided in Prerequisites.

Configuring connections to AWS S3 locations is described in Configuring AWS credentials.

Configuring the connection to GCE is described in Configuring the cloud connection.

Submitting workflows to run on GCE is described in Running workflows on a CLC Genomics Cloud Engine.

If you have access to a CLC Genomics Server with the Cloud Server Plugin installed and configured, then workflows can be submitted to run on GCE via the CLC Server, as described in Cloud connections via a CLC Server.

General information on setting up and launching workflows is provided in the CLC Workbench manuals: https://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/index.php?manual=Workflows.html

If your organization does not yet have access to CLC Genomics Cloud Engine, you can read more about it and request a quote here: https://digitalinsights.qiagen.com/products-overview/discovery-insights-portfolio/enterprise-ngs-solutions/qiagen-clc-genomics-cloud-engine/

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Subsections

• Prerequisites

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