Regions and events table

This table has a row for each coverage region that has been examined for potential genes and transcripts (see step 2 in Algorithm and parameter description). It has the following columns:
Region
the region of the coverage region.
Overlapping genes
The names of overlapping genes, if any.
Total reads
The number of reads in the events of the coverage region.
Un-spliced
The number of spliced reads in the events of the coverage region.
Spliced
The number of spliced reads in the events of the coverage region.
Events
The number of events in the coverage region.
Events (after filtering)
The number of events after filtering in the coverage region.
In addition, for each gene region within the coverage region, it will have a set of the following five columns:
Region
The region of the gene.
Gene
The name of the gene.
Events
The number of events in the gene region before filtering.
Filtered
The number of events in the gene region after filtering.
Filtered description
A summary of how many event were filtered by each of the filters (e.g. 'Observations(2), Uncertain(2)').