Selecting the reads
To start the read mapping:
        Toolbox | Resequencing Analysis ( ) | Map Reads to Reference (
) | Map Reads to Reference ( )
)
In the first dialog, select the sequences or sequence lists containing the sequencing data (figure 28.1). Please note that reads longer than 100,000 bases are not supported.
   
  Figure 28.1: Specifying the reads as input. You can also choose to work in batch. 
