RNA-Seq Analysis tools
Based on an annotated reference genome, the Biomedical Genomics Workbench supports RNA-Seq Analysis by mapping next-generation sequencing reads and distributing and counting the reads across genes and transcripts. Subsequently, the results can be used for expression analysis. Additional tools in the RNA-Seq folder require RNA-Seq input data in the form of Expression Tracks, unlike the tools included in the "Microarray and Small RNA" folder that also support microarray data or Experiment objects.
Subsections
- RNA-Seq analysis
- Create Combined RNA-Seq Report
- Create fold change track
- Advanced RNA-Seq Tools
- PCA for RNA-Seq
- Differential Expression for RNA-Seq
- Create Heat Map for RNA-Seq
- Create Expression Browser
- Create Venn Diagram for RNA-Seq
- Gene Set Test