Manuals
Browse the manual
Introduction
Genome finishing and working with shared data
System requirements and installation of the CLC Genome Finishing Module
System requirements
How to install a Workbench plugin
Plugins licenses
How to uninstall a Workbench plugin
How to install a Server module
Align Contigs
How to run the Align Contigs tool
How to use the Align Contigs tool
The Contig table
The Contig match table
Joining two contigs
Splitting a contig
Adding new data
Analyze Contigs
How to run the Analyze Contigs tool
How to use the Analyze Contigs tool
The contig analysis table
How to edit data following contig analysis
Create Amplicons
How to run the Create Amplicons tool
Create Primers
How to use the Create Primers tool
Create Primers output
Primer scoring
Temperature calculation
Add Reads to Contigs
How to run the Add reads to contigs
Find Sequence
How to run the Find Sequence tool
The Find Sequence output
Collect Paired Read Statistics
How to run the Collect Paired Read Statistics tool
How to use the Collect Paired Read Statistics tool
Reassemble Regions
How to run Reassemble Regions
Extend Contigs
How to run Extend Contigs
Join Contigs
How to run the Join Contigs tool
Remove Extension of Contigs
How to run the Remove Extension of Contigs tool
Annotate from Reference
How to run the Annotate from Reference tool
Import of PacBio reads
Correct PacBio Reads
How to run the Correct PacBio Reads tool
Error-correction report
De Novo Assemble PacBio Reads
How to run the De Novo Assemble PacBio Reads tool
De Novo Assemble PacBio Reads report
Workflows
PacBio De Novo Assembly Pipeline
Licensing requirements for the CLC Genome Finishing Module
Workbench licenses
Request an evaluation license
Download a license using a license order ID
Import a license from a file
Configure license server connection
Download a static license on a non-networked computer
Server licenses
Static license installation
Windows license download
macOS license download
Linux license download
Download a static license on a non-networked machine
Network license installation
Bibliography
The Find Sequence output
The output is a table showing the search hits with name, location and involved objects. In the table it is possible to right click on the search hit of interest, which enables you to open the relevant element.