Figure 19.17: Selecting the reads to include.
When right-clicking on the sequences (as opposed to the consensus sequence), the menu to the right of figure 19.17 is available, and allows you to Extract Sequences from the mapping as explained in Extract sequences. As opposed to the Extract from Selection tool, the Extract sequences will include all reads, not only the ones covered by the selection.
Figure 19.17: Selecting the reads to include.