Reports generated by the following tools in CLC Genomics Workbench 23.0.5 can be combined using the Combine Reports and Create Sample Report tools. In addition to the list below, reports generated by some tools delivered by plugins are also supported.
In addition, Combine Reports can also take as input reports previously combined reports, as well as sample reports created by the Create Sample Report, allowing the generation of comprehensive, cross-sample summary reports27.1.
- Call Methylation Levels
- Copy Number Variant Detection (CNVs)
- Create Variant Track Statistics Report
- Demultiplex Reads
- Detect and Refine Fusion Genes
- De Novo Assembly
- Indels and Structural Variants
- Map Bisulfite Reads to Reference
- Map Reads to Reference
- QC for Read Mapping
- QC for Sequencing Reads
- QC for Targeted Sequencing
- RNA-Seq Analysis
- Remove Duplicate Mapped Reads
- Trim Reads
- Trim Sequences
- Whole Genome Coverage Analysis
If you wish to include information from other report types, or combine information in a customized way, reports can be exported to JSON format, as described here.
- ... reports27.1
- Combine Reports and Create Sample Report supports reports generated using CLC Genomics Workbench version 20.0 and corresponding versions of plugins and server software. Information from reports generated by earlier software versions will not appear in the output.