--compression <[NONE, GZIP, ZIP]> |
By selecting e.g. zip or gzip the exported result will be compressed (default: NONE) |
-d, --destination <ClcFileUrl> |
The destination to export the files to |
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--enforce-diploid <Boolean> |
This will treat the data as diploid when creating the vcf file. This means that homozygous variants will be represented with two genotypes. (default: false) |
--exclude-from-diploid <String> |
Select one or more chromosomes that should not be treated as diploid (e.g. male X and Y, and MT for humans). |
--filenamepattern <String> |
Custom file name can be used to control the output file names. In case of exporting one file just use the desired file name. In case of exporting multiple files consider using the expansion keywords. 1 expands to the input element name and 2 expands to the extension for the exporter. See the manual for further details. (default: 1.2) |
-i, --input <ClcObjectUrl> |
Input data on server |
--log <Boolean> |
Enable creation of algo log file. (default: false) |
--reference-track <ClcObjectUrl> |
Reference sequence track |