import

-d, --destination <ClcServerObjectUrl> Destination file or folder on server. If not specified the folder of the first input object will be used.
-f,
--format <Importerace ACE files (.ace)
automaticimport Automatic
blast_db BLAST Db (.phr/.pal - Protein, .nhr/.nal - Nucleotide)
bsml DS Gene (bsml) Name of importer
cas
chp Expression array data: Affymetrix .CHP file (.chp) CLC Assembly (.cas)
clc
clustalw Clustal Alignment (.aln) CLC (.clc)
cm5
com.clcbio.api.structure.base.io.P Protein Data Bank (.pdb/.ent) Clone Manager files (.cm5)
com.clcbio.baseimplementation.impo Trim adapter list (.xls/.xlsx/.csv)
lugin
com.clcbio.genomics.base.algo.rnas
eq.smallrna.MirBaseImporter MiRBase (.dat)
embl
excel Excel (.xls/.xlsx) Embl (.emb/.embl)
expression_annotation
expression_data_table Generic expression data table format (.txt/.text, .csv) Generic annotation file for expression data (.csv / .txt)
expressionarray
externalfile External File Expression array data: Affymetrix metrics or pivot file (.txt/.text, .csv)
fasta
fasta_alignment FASTA Alignment (.fa/.fsa/.fasta) FASTA (.fa/.fsa/.fasta)
gcg
gck Gene Construction Kit File (.gcc) GCG sequence (protein/nucleotide) (.gcg)
genbank
gene_ontology Gene Ontology Annotation file GenBank (.gbk/.gb/.gp)
illumina_annotation
illumina_expression Illumina expression file (.txt/.text) Illumina annotation file (.csv/.txt/.text)
lasergene
msf GCG Alignment (.msf) Lasergene sequence (protein/nucleotide) (.pro/.seq)
netaffx
newick Newick (.nwk/.newick) Expression array data: Affymetrix NetAffx annotation file (.txt/.text, .csv)
nexus
phylib Phylip Alignment (.phy) Nexus data (.nxs/.nexus)
pir
raw_sequence Raw sequence data PIR (.pir)
rna_structure
sam_bam SAM/BAM files RNA Structure (.ct, .col, .rnaml/.xml)
sequence_csv
soft_geo_sample Expression array data: GEO SOFT format sample file (.txt/.text) Sequences in CSV format (.csv)
soft_geo_series
staden Staden sequence (.sdn) Expression array data: GEO SOFT format series file (.txt/.text)
strider
swissprot SwissProt (.swp) DNA Strider files (.str/.strider)
table_csv
text Plain Text (.txt/.text) Table in CSV format (.csv)
trace
zip Archive file (.zip, .gz, .tar) Trace files (.abi/.ab1/.scf/.phd)
-s, --source <ClcFileUrl> Location of client or server file to be imported. If referring to client file, the file will be copied to the server. If referring to a file within the server file system, it must be within the server data import locations.