Create an alignment
To create an alignment in CLC Sequence Viewer:
Toolbox | Alignments and Trees (
)|
Create Alignment (
)
This opens the dialog shown in figure 12.1.
Figure 12.1: Creating an alignment.
If you have selected some elements before choosing the Toolbox action, they are now listed in the Selected Elements window of the dialog. Use the arrows to add or remove sequences, sequence lists or alignments from the selected elements. Click Next to adjust alignment algorithm parameters. Clicking Next opens the dialog shown in figure 12.2.
Figure 12.2: Adjusting alignment algorithm parameters.
Subsections